J5_9MTP_014

3D structure

PDB id

9MTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

9MTP|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTP|1|2A|C|601
9MTP|1|2A|G|602
9MTP|1|2A|A|603
9MTP|1|2A|G|604
*
9MTP|1|2A|C|624
9MTP|1|2A|G|625
9MTP|1|2A|U|626
9MTP|1|2A|A|627
9MTP|1|2A|G|628
*
9MTP|1|2A|C|635
9MTP|1|2A|G|636
9MTP|1|2A|A|637
9MTP|1|2A|G|638
*
9MTP|1|2A|C|650
9MTP|1|2A|G|651
9MTP|1|2A|C|652
9MTP|1|2A|A|652|||A
9MTP|1|2A|A|652|||B
9MTP|1|2A|G|652|||C
*
9MTP|1|2A|C|652|||V
9MTP|1|2A|A|653
9MTP|1|2A|A|654
9MTP|1|2A|A|655
9MTP|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15