J5_9MTQ_014

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

9MTQ|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|2A|C|601
9MTQ|1|2A|G|602
9MTQ|1|2A|A|603
9MTQ|1|2A|G|604
*
9MTQ|1|2A|C|624
9MTQ|1|2A|G|625
9MTQ|1|2A|U|626
9MTQ|1|2A|A|627
9MTQ|1|2A|G|628
*
9MTQ|1|2A|C|635
9MTQ|1|2A|G|636
9MTQ|1|2A|A|637
9MTQ|1|2A|G|638
*
9MTQ|1|2A|C|650
9MTQ|1|2A|G|651
9MTQ|1|2A|C|652
9MTQ|1|2A|A|652|||A
9MTQ|1|2A|A|652|||B
9MTQ|1|2A|G|652|||C
*
9MTQ|1|2A|C|652|||V
9MTQ|1|2A|A|653
9MTQ|1|2A|A|654
9MTQ|1|2A|A|655
9MTQ|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15