J5_9MTQ_018

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUGG*CUUG*CUGAAC*GGUAAUAG*CGAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|2a|C|36
9MTQ|1|2a|U|37
9MTQ|1|2a|G|38
9MTQ|1|2a|G|39
*
9MTQ|1|2a|C|403
9MTQ|1|2a|U|404
9MTQ|1|2a|U|405
9MTQ|1|2a|G|406
*
9MTQ|1|2a|C|436
9MTQ|1|2a|U|437
9MTQ|1|2a|G|438
9MTQ|1|2a|A|439
9MTQ|1|2a|A|441
9MTQ|1|2a|C|442
*
9MTQ|1|2a|G|492
9MTQ|1|2a|G|493
9MTQ|1|2a|U|494
9MTQ|1|2a|A|495
9MTQ|1|2a|A|496
9MTQ|1|2a|U|498
9MTQ|1|2a|A|499
9MTQ|1|2a|G|500
*
9MTQ|1|2a|C|545
9MTQ|1|2a|G|546
9MTQ|1|2a|A|547
9MTQ|1|2a|G|548

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2d

30S ribosomal protein S4

Chain 2l

30S ribosomal protein S12