3D structure

PDB id
9MTR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
CGACUC*GGAC*GUUC*GC*GCGAAUG
Length
23 nucleotides
Bulged bases
9MTR|1|2A|U|1255
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MTR|1|2A|C|584
9MTR|1|2A|G|585
9MTR|1|2A|A|586
9MTR|1|2A|C|587
9MTR|1|2A|U|588
9MTR|1|2A|C|589
*
9MTR|1|2A|G|668
9MTR|1|2A|G|669
9MTR|1|2A|A|670
9MTR|1|2A|C|671
*
9MTR|1|2A|G|809
9MTR|1|2A|U|810
9MTR|1|2A|U|811
9MTR|1|2A|C|812
*
9MTR|1|2A|G|1195
9MTR|1|2A|C|1196
*
9MTR|1|2A|G|1250
9MTR|1|2A|C|1251
9MTR|1|2A|G|1252
9MTR|1|2A|A|1253
9MTR|1|2A|A|1254
9MTR|1|2A|U|1255
9MTR|1|2A|G|1256

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 28
50S ribosomal protein L35
Chain 2F
50S ribosomal protein L4
Chain 2P
50S ribosomal protein L15
Chain 2U
50S ribosomal protein L20
Chain 2V
50S ribosomal protein L21

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1421 s