J5_9MTR_014

3D structure

PDB id

9MTR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

9MTR|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTR|1|2A|C|601
9MTR|1|2A|G|602
9MTR|1|2A|A|603
9MTR|1|2A|G|604
*
9MTR|1|2A|C|624
9MTR|1|2A|G|625
9MTR|1|2A|U|626
9MTR|1|2A|A|627
9MTR|1|2A|G|628
*
9MTR|1|2A|C|635
9MTR|1|2A|G|636
9MTR|1|2A|A|637
9MTR|1|2A|G|638
*
9MTR|1|2A|C|650
9MTR|1|2A|G|651
9MTR|1|2A|C|652
9MTR|1|2A|A|652|||A
9MTR|1|2A|A|652|||B
9MTR|1|2A|G|652|||C
*
9MTR|1|2A|C|652|||V
9MTR|1|2A|A|653
9MTR|1|2A|A|654
9MTR|1|2A|A|655
9MTR|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15