J5_9MTS_013

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGACUC*GGAC*GUUC*GC*GCGAAUG

Length

23 nucleotides

Bulged bases

9MTS|1|2A|U|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTS|1|2A|C|584
9MTS|1|2A|G|585
9MTS|1|2A|A|586
9MTS|1|2A|C|587
9MTS|1|2A|U|588
9MTS|1|2A|C|589
*
9MTS|1|2A|G|668
9MTS|1|2A|G|669
9MTS|1|2A|A|670
9MTS|1|2A|C|671
*
9MTS|1|2A|G|809
9MTS|1|2A|U|810
9MTS|1|2A|U|811
9MTS|1|2A|C|812
*
9MTS|1|2A|G|1195
9MTS|1|2A|C|1196
*
9MTS|1|2A|G|1250
9MTS|1|2A|C|1251
9MTS|1|2A|G|1252
9MTS|1|2A|A|1253
9MTS|1|2A|A|1254
9MTS|1|2A|U|1255
9MTS|1|2A|G|1256

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15

Chain 2U

50S ribosomal protein L20

Chain 2V

50S ribosomal protein L21