J5_9MTT_014

3D structure

PDB id

9MTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

9MTT|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTT|1|2A|C|601
9MTT|1|2A|G|602
9MTT|1|2A|A|603
9MTT|1|2A|G|604
*
9MTT|1|2A|C|624
9MTT|1|2A|G|625
9MTT|1|2A|U|626
9MTT|1|2A|A|627
9MTT|1|2A|G|628
*
9MTT|1|2A|C|635
9MTT|1|2A|G|636
9MTT|1|2A|A|637
9MTT|1|2A|G|638
*
9MTT|1|2A|C|650
9MTT|1|2A|G|651
9MTT|1|2A|C|652
9MTT|1|2A|A|652|||A
9MTT|1|2A|A|652|||B
9MTT|1|2A|G|652|||C
*
9MTT|1|2A|C|652|||V
9MTT|1|2A|A|653
9MTT|1|2A|A|654
9MTT|1|2A|A|655
9MTT|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15