J5_9N79_004
3D structure
- PDB id
- 9N79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SSU processome maturation and disassembly, State M
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.93 Å
Loop
- Sequence
- ACUUUG*UUUCCU*ACUUU*AUAGAAUAGGA*UAAUGAU
- Length
- 35 nucleotides
- Bulged bases
- 9N79|1|L1|U|639, 9N79|1|L1|U|694, 9N79|1|L1|C|696, 9N79|1|L1|U|813, 9N79|1|L1|G|815, 9N79|1|L1|A|856
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9N79|1|L1|A|636
9N79|1|L1|C|637
9N79|1|L1|U|638
9N79|1|L1|U|639
9N79|1|L1|U|640
9N79|1|L1|G|641
*
9N79|1|L1|U|693
9N79|1|L1|U|694
9N79|1|L1|U|695
9N79|1|L1|C|696
9N79|1|L1|C|697
9N79|1|L1|U|698
*
9N79|1|L1|A|740
9N79|1|L1|C|741
9N79|1|L1|U|742
9N79|1|L1|U|743
9N79|1|L1|U|744
*
9N79|1|L1|A|807
9N79|1|L1|U|808
9N79|1|L1|A|809
9N79|1|L1|G|810
9N79|1|L1|A|811
9N79|1|L1|A|812
9N79|1|L1|U|813
9N79|1|L1|A|814
9N79|1|L1|G|815
9N79|1|L1|G|816
9N79|1|L1|A|817
*
9N79|1|L1|U|854
9N79|1|L1|A|855
9N79|1|L1|A|856
9N79|1|L1|U|857
9N79|1|L1|G|858
9N79|1|L1|A|859
9N79|1|L1|U|860
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L7
- 40S ribosomal protein S7-A
- Chain LD
- 40S ribosomal protein S11-A
- Chain LE
- 40S ribosomal protein S22-A
- Chain NF
- 40S ribosomal protein S13
Coloring options: