J5_9NKL_008
3D structure
- PDB id
- 9NKL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGCAAG*CGGACGGG*CAC*GAC*GGCAGCA
- Length
- 27 nucleotides
- Bulged bases
- 9NKL|1|R3|A|109, 9NKL|1|R3|C|352, 9NKL|1|R3|A|353
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NKL|1|R3|U|56
9NKL|1|R3|G|57
9NKL|1|R3|C|58
9NKL|1|R3|A|59
9NKL|1|R3|A|60
9NKL|1|R3|G|61
*
9NKL|1|R3|C|106
9NKL|1|R3|G|107
9NKL|1|R3|G|108
9NKL|1|R3|A|109
9NKL|1|R3|C|110
9NKL|1|R3|G|111
9NKL|1|R3|G|112
9NKL|1|R3|G|113
*
9NKL|1|R3|C|314
9NKL|1|R3|A|315
9NKL|1|R3|C|316
*
9NKL|1|R3|G|337
9NKL|1|R3|A|338
9NKL|1|R3|C|339
*
9NKL|1|R3|G|350
9NKL|1|R3|G|351
9NKL|1|R3|C|352
9NKL|1|R3|A|353
9NKL|1|R3|G|354
9NKL|1|R3|C|355
9NKL|1|R3|A|356
Current chains
- Chain R3
- 16S ribosomal RNA
Nearby chains
- Chain 14
- 50S ribosomal protein L14
- Chain 19
- 50S ribosomal protein L19
- Chain sp
- Small ribosomal subunit protein bS16
- Chain st
- 30S ribosomal protein S20
Coloring options: