J5_9O3K_005
3D structure
- PDB id
- 9O3K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GCAAGUUGG*UG*CC*GUGAACAGG*CGC
- Length
- 25 nucleotides
- Bulged bases
- 9O3K|1|1A|G|1758, 9O3K|1|1A|G|1763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9O3K|1|1A|G|1674
9O3K|1|1A|C|1675
9O3K|1|1A|A|1676
9O3K|1|1A|A|1677
9O3K|1|1A|G|1678
9O3K|1|1A|U|1679
9O3K|1|1A|U|1680
9O3K|1|1A|G|1681
9O3K|1|1A|G|1682
*
9O3K|1|1A|U|1706
9O3K|1|1A|G|1707
*
9O3K|1|1A|C|1751
9O3K|1|1A|C|1752
*
9O3K|1|1A|G|1756
9O3K|1|1A|U|1757
9O3K|1|1A|G|1758
9O3K|1|1A|A|1759
9O3K|1|1A|A|1760
9O3K|1|1A|C|1761
9O3K|1|1A|A|1762
9O3K|1|1A|G|1763
9O3K|1|1A|G|1764
*
9O3K|1|1A|C|1988
9O3K|1|1A|G|1989
9O3K|1|1A|C|1990
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1E
- 50S ribosomal protein L3
- Chain 1O
- 50S ribosomal protein L14
- Chain 1T
- 50S ribosomal protein L19
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: