J5_9PJ8_002
3D structure
- PDB id
- 9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Sarecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCG*UAAAGAAG*CGAG
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PJ8|1|A|C|40
9PJ8|1|A|U|41
9PJ8|1|A|G|42
9PJ8|1|A|G|43
*
9PJ8|1|A|C|405
9PJ8|1|A|G|406
9PJ8|1|A|U|407
9PJ8|1|A|G|408
*
9PJ8|1|A|C|438
9PJ8|1|A|U|439
9PJ8|1|A|U|440
9PJ8|1|A|U|441
9PJ8|1|A|C|442
9PJ8|1|A|G|443
*
9PJ8|1|A|U|475
9PJ8|1|A|A|476
9PJ8|1|A|A|477
9PJ8|1|A|A|478
9PJ8|1|A|G|479
9PJ8|1|A|A|480
9PJ8|1|A|A|481
9PJ8|1|A|G|482
*
9PJ8|1|A|C|527
9PJ8|1|A|G|528
9PJ8|1|A|A|529
9PJ8|1|A|G|530
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain L
- 30S ribosomal protein S12
Coloring options: