J5_9PRD_003
3D structure
- PDB id
- 9PRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 9PRD|1|A|A|2725, 9PRD|1|A|A|2935, 9PRD|1|A|U|2936, 9PRD|1|A|U|3096, 9PRD|1|A|U|3097
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PRD|1|A|A|2720
9PRD|1|A|G|2721
9PRD|1|A|A|2722
9PRD|1|A|A|2723
9PRD|1|A|G|2724
9PRD|1|A|A|2725
9PRD|1|A|C|2726
9PRD|1|A|C|2727
*
9PRD|1|A|G|2933
9PRD|1|A|G|2934
9PRD|1|A|A|2935
9PRD|1|A|U|2936
9PRD|1|A|A|2937
9PRD|1|A|A|2938
9PRD|1|A|C|2939
9PRD|1|A|A|2940
*
9PRD|1|A|U|2987
9PRD|1|A|C|2988
9PRD|1|A|G|2989
9PRD|1|A|A|2990
9PRD|1|A|U|2991
9PRD|1|A|G|2992
9PRD|1|A|U|2993
9PRD|1|A|U|2994
*
9PRD|1|A|A|3069
9PRD|1|A|G|3070
9PRD|1|A|U|3071
9PRD|1|A|U|3072
9PRD|1|A|C|3073
9PRD|1|A|A|3074
9PRD|1|A|G|3075
*
9PRD|1|A|C|3093
9PRD|1|A|G|3094
9PRD|1|A|G|3095
9PRD|1|A|U|3096
9PRD|1|A|U|3097
9PRD|1|A|U|3098
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain Ax
- P/P-tRNA
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain n
- Nascent polypeptide
Coloring options: