J5_9PZG_003

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GAC*GGCAG

Length

23 nucleotides

Bulged bases

9PZG|1|A|A|109, 9PZG|1|A|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PZG|1|A|C|58
9PZG|1|A|A|59
9PZG|1|A|A|60
9PZG|1|A|G|61
*
9PZG|1|A|C|106
9PZG|1|A|G|107
9PZG|1|A|G|108
9PZG|1|A|A|109
9PZG|1|A|C|110
9PZG|1|A|G|111
9PZG|1|A|G|112
9PZG|1|A|G|113
*
9PZG|1|A|C|314
9PZG|1|A|A|315
9PZG|1|A|C|316
*
9PZG|1|A|G|337
9PZG|1|A|A|338
9PZG|1|A|C|339
*
9PZG|1|A|G|350
9PZG|1|A|G|351
9PZG|1|A|C|352
9PZG|1|A|A|353
9PZG|1|A|G|354

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain T

Small ribosomal subunit protein bS20