J5_9Q2M_006
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUGUCU*AAAAAUAAC*GGAAUG*CCAU*AUAG
- Length
- 30 nucleotides
- Bulged bases
- 9Q2M|1|9|C|517
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2M|1|9|C|30
9Q2M|1|9|U|31
9Q2M|1|9|U|32
9Q2M|1|9|G|33
9Q2M|1|9|U|34
9Q2M|1|9|C|35
9Q2M|1|9|U|36
*
9Q2M|1|9|A|443
9Q2M|1|9|A|444
9Q2M|1|9|A|445
9Q2M|1|9|A|446
9Q2M|1|9|A|447
9Q2M|1|9|U|448
9Q2M|1|9|A|449
9Q2M|1|9|A|450
9Q2M|1|9|C|451
*
9Q2M|1|9|G|482
9Q2M|1|9|G|483
9Q2M|1|9|A|484
9Q2M|1|9|A|485
9Q2M|1|9|U|486
9Q2M|1|9|G|487
*
9Q2M|1|9|C|516
9Q2M|1|9|C|517
9Q2M|1|9|A|518
9Q2M|1|9|U|519
*
9Q2M|1|9|A|565
9Q2M|1|9|U|566
9Q2M|1|9|A|567
9Q2M|1|9|G|568
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain JJ
- 40S ribosomal protein S9
- Chain XX
- 40S ribosomal protein S23
- Chain YY
- 40S ribosomal protein S24
- Chain ee
- Small ribosomal subunit protein eS30
Coloring options: