J5_9QLO_008

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

9QLO|1|S2|G|126, 9QLO|1|S2|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|S2|G|123
9QLO|1|S2|U|124
9QLO|1|S2|C|125
9QLO|1|S2|G|126
9QLO|1|S2|C|127
9QLO|1|S2|U|128
9QLO|1|S2|C|129
*
9QLO|1|S2|G|183
9QLO|1|S2|G|184
9QLO|1|S2|G|185
*
9QLO|1|S2|U|214
9QLO|1|S2|G|215
*
9QLO|1|S2|C|310
9QLO|1|S2|C|311
9QLO|1|S2|G|312
*
9QLO|1|S2|C|337
9QLO|1|S2|G|338
9QLO|1|S2|A|339
9QLO|1|S2|C|340
9QLO|1|S2|C|341

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8