J5_9QLP_008

3D structure

PDB id

9QLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

9QLP|1|S2|G|126, 9QLP|1|S2|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLP|1|S2|G|123
9QLP|1|S2|U|124
9QLP|1|S2|C|125
9QLP|1|S2|G|126
9QLP|1|S2|C|127
9QLP|1|S2|U|128
9QLP|1|S2|C|129
*
9QLP|1|S2|G|183
9QLP|1|S2|G|184
9QLP|1|S2|G|185
*
9QLP|1|S2|U|214
9QLP|1|S2|G|215
*
9QLP|1|S2|C|310
9QLP|1|S2|C|311
9QLP|1|S2|G|312
*
9QLP|1|S2|C|337
9QLP|1|S2|G|338
9QLP|1|S2|A|339
9QLP|1|S2|C|340
9QLP|1|S2|C|341

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8