J5_9QOH_008
3D structure
- PDB id
- 9QOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAUG*CGAAUGGC*GA(OMG)*CAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 9QOH|1|m2|A|92, 9QOH|1|m2|C|474
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QOH|1|m2|C|53
9QOH|1|m2|A|54
9QOH|1|m2|U|55
9QOH|1|m2|G|56
*
9QOH|1|m2|C|89
9QOH|1|m2|G|90
9QOH|1|m2|A|91
9QOH|1|m2|A|92
9QOH|1|m2|U|93
9QOH|1|m2|G|94
9QOH|1|m2|G|95
9QOH|1|m2|C|96
*
9QOH|1|m2|G|436
9QOH|1|m2|A|437
9QOH|1|m2|OMG|438
*
9QOH|1|m2|C|459
9QOH|1|m2|A|460
9QOH|1|m2|C|461
*
9QOH|1|m2|G|472
9QOH|1|m2|G|473
9QOH|1|m2|C|474
9QOH|1|m2|A|475
9QOH|1|m2|G|476
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain K3
- Small ribosomal subunit protein eS6
- Chain L3
- Small ribosomal subunit protein uS4
- Chain P2
- Large ribosomal subunit protein uL14
- Chain Q3
- Small ribosomal subunit protein eS24
- Chain r2
- Small ribosomal subunit protein eS4
- Chain u2
- Small ribosomal subunit protein eS8
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