J5_9QQP_001
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GUG*CGAUGAAG*CGAACG*CG*UAC
- Length
- 22 nucleotides
- Bulged bases
- 9QQP|1|C2|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|A2|G|19
9QQP|1|A2|U|20
9QQP|1|A2|G|21
*
9QQP|1|C2|C|35
9QQP|1|C2|G|36
9QQP|1|C2|A|37
9QQP|1|C2|U|38
9QQP|1|C2|G|39
9QQP|1|C2|A|40
9QQP|1|C2|A|41
9QQP|1|C2|G|42
*
9QQP|1|C2|C|101
9QQP|1|C2|G|102
9QQP|1|C2|A|103
9QQP|1|C2|A|104
9QQP|1|C2|C|105
9QQP|1|C2|G|106
*
9QQP|1|C2|C|113
9QQP|1|C2|G|114
*
9QQP|1|C2|U|136
9QQP|1|C2|A|137
9QQP|1|C2|C|138
Current chains
- Chain A2
- 28S ribosomal RNA
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain H1
- Large ribosomal subunit protein eL15
- Chain R2
- Large ribosomal subunit protein uL23
- Chain b2
- Large ribosomal subunit protein uL29
- Chain d2
- Large ribosomal subunit protein eL37
- Chain f2
- Large ribosomal subunit protein eL39
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