J5_9QQP_007
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUA(OMG)
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|m2|C|30
9QQP|1|m2|U|31
9QQP|1|m2|U|32
9QQP|1|m2|G|33
9QQP|1|m2|U|34
*
9QQP|1|m2|A|523
9QQP|1|m2|A|524
9QQP|1|m2|A|525
9QQP|1|m2|U|526
9QQP|1|m2|A|527
9QQP|1|m2|A|528
9QQP|1|m2|C|529
*
9QQP|1|m2|G|560
9QQP|1|m2|G|561
9QQP|1|m2|A|562
9QQP|1|m2|A|563
9QQP|1|m2|U|564
9QQP|1|m2|G|565
9QQP|1|m2|A|566
9QQP|1|m2|G|567
*
9QQP|1|m2|C|587
9QQP|1|m2|G|588
9QQP|1|m2|A|589
9QQP|1|m2|G|590
9QQP|1|m2|G|591
9QQP|1|m2|A|592
9QQP|1|m2|U|593
9QQP|1|m2|C|594
9QQP|1|m2|C|595
9QQP|1|m2|A|596
9QQP|1|m2|U|597
*
9QQP|1|m2|A|643
9QQP|1|m2|U|644
9QQP|1|m2|A|645
9QQP|1|m2|OMG|646
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain E3
- Small ribosomal subunit protein uS12
- Chain L3
- Small ribosomal subunit protein uS4
- Chain Q3
- Small ribosomal subunit protein eS24
- Chain T3
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
Coloring options: