J5_9RPV_015
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CUUG(PSU)*AAAUAAC*GGAAUGAG*CGAGG(A2M)UCCAU*AUA(OMG)
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, A2M, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|S3|C|30
9RPV|1|S3|U|31
9RPV|1|S3|U|32
9RPV|1|S3|G|33
9RPV|1|S3|PSU|34
*
9RPV|1|S3|A|521
9RPV|1|S3|A|522
9RPV|1|S3|A|523
9RPV|1|S3|U|524
9RPV|1|S3|A|525
9RPV|1|S3|A|526
9RPV|1|S3|C|527
*
9RPV|1|S3|G|558
9RPV|1|S3|G|559
9RPV|1|S3|A|560
9RPV|1|S3|A|561
9RPV|1|S3|U|562
9RPV|1|S3|G|563
9RPV|1|S3|A|564
9RPV|1|S3|G|565
*
9RPV|1|S3|C|585
9RPV|1|S3|G|586
9RPV|1|S3|A|587
9RPV|1|S3|G|588
9RPV|1|S3|G|589
9RPV|1|S3|A2M|590
9RPV|1|S3|U|591
9RPV|1|S3|C|592
9RPV|1|S3|C|593
9RPV|1|S3|A|594
9RPV|1|S3|U|595
*
9RPV|1|S3|A|641
9RPV|1|S3|U|642
9RPV|1|S3|A|643
9RPV|1|S3|OMG|644
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RJ
- 40S ribosomal protein S9
- Chain RX
- 40S ribosomal protein S23
- Chain Re
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
Coloring options: