J5_9RPV_017
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CGCUC*GGG*UG*CCG*CG
- Length
- 15 nucleotides
- Bulged bases
- 9RPV|1|S3|G|126, 9RPV|1|S3|C|127
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|S3|C|125
9RPV|1|S3|G|126
9RPV|1|S3|C|127
9RPV|1|S3|U|128
9RPV|1|S3|C|129
*
9RPV|1|S3|G|183
9RPV|1|S3|G|184
9RPV|1|S3|G|185
*
9RPV|1|S3|U|214
9RPV|1|S3|G|215
*
9RPV|1|S3|C|310
9RPV|1|S3|C|311
9RPV|1|S3|G|312
*
9RPV|1|S3|C|337
9RPV|1|S3|G|338
Current chains
- Chain S3
- 18S rRNA of the stalled 80S
Nearby chains
- Chain RE
- Small ribosomal subunit protein eS4, X isoform
- Chain RG
- 40S ribosomal protein S6
- Chain RI
- 40S ribosomal protein S8
Coloring options: