3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUGG*CGUG*CUUUC*GAAG*CAAG
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTU|1|a|C|36
9RTU|1|a|U|37
9RTU|1|a|G|38
9RTU|1|a|G|39
*
9RTU|1|a|C|403
9RTU|1|a|G|404
9RTU|1|a|U|405
9RTU|1|a|G|406
*
9RTU|1|a|C|436
9RTU|1|a|U|437
9RTU|1|a|U|438
9RTU|1|a|U|439
9RTU|1|a|C|440
*
9RTU|1|a|G|497
9RTU|1|a|A|498
9RTU|1|a|A|499
9RTU|1|a|G|500
*
9RTU|1|a|C|545
9RTU|1|a|A|546
9RTU|1|a|A|547
9RTU|1|a|G|548

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain d
Small ribosomal subunit protein uS4
Chain l
30S ribosomal protein S12

Coloring options:

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