3D structure

PDB id
9RTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CAAG*CGGACGGG*CAC*GAC*GGCAG
Length
23 nucleotides
Bulged bases
9RTU|1|a|A|109, 9RTU|1|a|C|352
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RTU|1|a|C|58
9RTU|1|a|A|59
9RTU|1|a|A|60
9RTU|1|a|G|61
*
9RTU|1|a|C|106
9RTU|1|a|G|107
9RTU|1|a|G|108
9RTU|1|a|A|109
9RTU|1|a|C|110
9RTU|1|a|G|111
9RTU|1|a|G|112
9RTU|1|a|G|113
*
9RTU|1|a|C|314
9RTU|1|a|A|315
9RTU|1|a|C|316
*
9RTU|1|a|G|337
9RTU|1|a|A|338
9RTU|1|a|C|339
*
9RTU|1|a|G|350
9RTU|1|a|G|351
9RTU|1|a|C|352
9RTU|1|a|A|353
9RTU|1|a|G|354

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain K
50S ribosomal protein L14
Chain p
30S ribosomal protein S16
Chain t
30S ribosomal protein S20
Chain x
Elongation factor G

Coloring options:

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