J5_9S7D_003
3D structure
- PDB id
- 9S7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 9S7D|1|A|A|2725, 9S7D|1|A|A|2935, 9S7D|1|A|U|3096, 9S7D|1|A|U|3097
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9S7D|1|A|A|2720
9S7D|1|A|G|2721
9S7D|1|A|A|2722
9S7D|1|A|A|2723
9S7D|1|A|G|2724
9S7D|1|A|A|2725
9S7D|1|A|C|2726
9S7D|1|A|C|2727
*
9S7D|1|A|G|2933
9S7D|1|A|G|2934
9S7D|1|A|A|2935
9S7D|1|A|U|2936
9S7D|1|A|A|2937
9S7D|1|A|A|2938
9S7D|1|A|C|2939
9S7D|1|A|A|2940
*
9S7D|1|A|U|2987
9S7D|1|A|C|2988
9S7D|1|A|G|2989
9S7D|1|A|A|2990
9S7D|1|A|U|2991
9S7D|1|A|G|2992
9S7D|1|A|U|2993
9S7D|1|A|U|2994
*
9S7D|1|A|A|3069
9S7D|1|A|G|3070
9S7D|1|A|U|3071
9S7D|1|A|U|3072
9S7D|1|A|C|3073
9S7D|1|A|A|3074
9S7D|1|A|G|3075
*
9S7D|1|A|C|3093
9S7D|1|A|G|3094
9S7D|1|A|G|3095
9S7D|1|A|U|3096
9S7D|1|A|U|3097
9S7D|1|A|U|3098
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL32m
- Chain Av
- COX1 nascent chain
- Chain Aw
- Transfer RNA; tRNA
- Chain Ax
- Transfer RNA; tRNA
- Chain E
- Large ribosomal subunit protein uL3m
- Chain F
- Large ribosomal subunit protein uL4m
- Chain M
- Large ribosomal subunit protein uL15m
- Chain N
- Large ribosomal subunit protein uL16m
- Chain T
- Large ribosomal subunit protein uL22m
Coloring options: