J5_9T0Y_006
3D structure
- PDB id
- 9T0Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from delta-9 strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.87 Å
Loop
- Sequence
- CGACUU*AGAC*GUUC*GC*GCGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 9T0Y|1|a|U|1255
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9T0Y|1|a|C|584
9T0Y|1|a|G|585
9T0Y|1|a|A|586
9T0Y|1|a|C|587
9T0Y|1|a|U|588
9T0Y|1|a|U|589
*
9T0Y|1|a|A|668
9T0Y|1|a|G|669
9T0Y|1|a|A|670
9T0Y|1|a|C|671
*
9T0Y|1|a|G|809
9T0Y|1|a|U|810
9T0Y|1|a|U|811
9T0Y|1|a|C|812
*
9T0Y|1|a|G|1195
9T0Y|1|a|C|1196
*
9T0Y|1|a|G|1250
9T0Y|1|a|C|1251
9T0Y|1|a|G|1252
9T0Y|1|a|A|1253
9T0Y|1|a|A|1254
9T0Y|1|a|U|1255
9T0Y|1|a|G|1256
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain e
- Large ribosomal subunit protein uL4
- Chain k
- Large ribosomal subunit protein uL15
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
Coloring options: