J5_9T6M_001

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAG*CAAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|A|C|36
9T6M|1|A|U|37
9T6M|1|A|G|38
9T6M|1|A|G|39
*
9T6M|1|A|C|403
9T6M|1|A|G|404
9T6M|1|A|U|405
9T6M|1|A|G|406
*
9T6M|1|A|C|436
9T6M|1|A|U|437
9T6M|1|A|U|438
9T6M|1|A|U|439
9T6M|1|A|C|440
*
9T6M|1|A|G|497
9T6M|1|A|A|498
9T6M|1|A|A|499
9T6M|1|A|G|500
*
9T6M|1|A|C|545
9T6M|1|A|A|546
9T6M|1|A|A|547
9T6M|1|A|G|548

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4

Chain L

Small ribosomal subunit protein uS12