J5_9T7H_011

3D structure

PDB id

9T7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUAU*AGUG*CUUUUC*GGAAUAAG*(4AC)GAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T7H|1|2|C|42
9T7H|1|2|U|43
9T7H|1|2|A|44
9T7H|1|2|U|45
*
9T7H|1|2|A|412
9T7H|1|2|G|413
9T7H|1|2|U|414
9T7H|1|2|G|415
*
9T7H|1|2|C|433
9T7H|1|2|U|434
9T7H|1|2|U|435
9T7H|1|2|U|436
9T7H|1|2|U|437
9T7H|1|2|C|438
*
9T7H|1|2|G|458
9T7H|1|2|G|459
9T7H|1|2|A|460
9T7H|1|2|A|461
9T7H|1|2|U|462
9T7H|1|2|A|463
9T7H|1|2|A|464
9T7H|1|2|G|465
*
9T7H|1|2|4AC|511
9T7H|1|2|G|512
9T7H|1|2|A|513
9T7H|1|2|G|514

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AN

30S ribosomal protein S12

Chain AV

30S ribosomal protein S24e