J5_9TI6_001

3D structure

PDB id

9TI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AAG

Length

22 nucleotides

Bulged bases

9TI6|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI6|1|A|C|47
9TI6|1|A|G|48
9TI6|1|A|A|49
9TI6|1|A|U|50
9TI6|1|A|G|51
9TI6|1|A|A|52
9TI6|1|A|A|53
9TI6|1|A|G|54
*
9TI6|1|A|C|115
9TI6|1|A|G|116
9TI6|1|A|A|117
9TI6|1|A|A|118
9TI6|1|A|U|119
9TI6|1|A|G|120
*
9TI6|1|A|C|129
9TI6|1|A|A|130
*
9TI6|1|A|U|149
9TI6|1|A|A|150
9TI6|1|A|U|151
*
9TI6|1|A|A|178
9TI6|1|A|A|179
9TI6|1|A|G|180

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34