J5_9TI7_001

3D structure

PDB id

9TI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AAG

Length

22 nucleotides

Bulged bases

9TI7|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI7|1|A|C|47
9TI7|1|A|G|48
9TI7|1|A|A|49
9TI7|1|A|U|50
9TI7|1|A|G|51
9TI7|1|A|A|52
9TI7|1|A|A|53
9TI7|1|A|G|54
*
9TI7|1|A|C|115
9TI7|1|A|G|116
9TI7|1|A|A|117
9TI7|1|A|A|118
9TI7|1|A|U|119
9TI7|1|A|G|120
*
9TI7|1|A|C|129
9TI7|1|A|A|130
*
9TI7|1|A|U|149
9TI7|1|A|A|150
9TI7|1|A|U|151
*
9TI7|1|A|A|178
9TI7|1|A|A|179
9TI7|1|A|G|180

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34