J5_9TI8_002
3D structure
- PDB id
- 9TI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.18 Å
Loop
- Sequence
- CCAAAC*GGGUUGUA*UGAGUAC*GGAAUCUG*UAAG
- Length
- 33 nucleotides
- Bulged bases
- 9TI8|1|A|U|301, 9TI8|1|A|U|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TI8|1|A|C|271
9TI8|1|A|C|272
9TI8|1|A|A|273
9TI8|1|A|A|274
9TI8|1|A|A|275
9TI8|1|A|C|276
*
9TI8|1|A|G|295
9TI8|1|A|G|296
9TI8|1|A|G|297
9TI8|1|A|U|298
9TI8|1|A|U|299
9TI8|1|A|G|300
9TI8|1|A|U|301
9TI8|1|A|A|302
*
9TI8|1|A|U|415
9TI8|1|A|G|416
9TI8|1|A|A|417
9TI8|1|A|G|418
9TI8|1|A|U|419
9TI8|1|A|A|420
9TI8|1|A|C|421
*
9TI8|1|A|G|445
9TI8|1|A|G|446
9TI8|1|A|A|447
9TI8|1|A|A|448
9TI8|1|A|U|449
9TI8|1|A|C|450
9TI8|1|A|U|451
9TI8|1|A|G|452
*
9TI8|1|A|U|467
9TI8|1|A|A|468
9TI8|1|A|A|469
9TI8|1|A|G|470
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
Coloring options: