J5_9TKN_002
3D structure
- PDB id
- 9TKN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 and IF1 bound (30S PIC-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKN|1|D1|C|36
9TKN|1|D1|U|37
9TKN|1|D1|G|38
9TKN|1|D1|G|39
*
9TKN|1|D1|C|403
9TKN|1|D1|G|404
9TKN|1|D1|U|405
9TKN|1|D1|G|406
*
9TKN|1|D1|C|436
9TKN|1|D1|U|437
9TKN|1|D1|U|438
9TKN|1|D1|U|439
9TKN|1|D1|C|440
9TKN|1|D1|A|441
9TKN|1|D1|G|442
*
9TKN|1|D1|C|492
9TKN|1|D1|A|493
9TKN|1|D1|G|494
9TKN|1|D1|A|495
9TKN|1|D1|A|496
9TKN|1|D1|G|497
9TKN|1|D1|A|498
9TKN|1|D1|A|499
9TKN|1|D1|G|500
*
9TKN|1|D1|C|545
9TKN|1|D1|A|546
9TKN|1|D1|A|547
9TKN|1|D1|G|548
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AC
- Small ribosomal subunit protein uS4
- Chain AK
- Small ribosomal subunit protein uS12
- Chain F2
- Translation initiation factor IF-2
Coloring options: