J5_9TKP_003
3D structure
- PDB id
- 9TKP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Initiation Complex with extended IF2 bound (70S IC-I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAC*GAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 9TKP|1|D1|A|109, 9TKP|1|D1|C|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKP|1|D1|C|58
9TKP|1|D1|A|59
9TKP|1|D1|A|60
9TKP|1|D1|G|61
*
9TKP|1|D1|C|106
9TKP|1|D1|G|107
9TKP|1|D1|G|108
9TKP|1|D1|A|109
9TKP|1|D1|C|110
9TKP|1|D1|G|111
9TKP|1|D1|G|112
9TKP|1|D1|G|113
*
9TKP|1|D1|C|314
9TKP|1|D1|A|315
9TKP|1|D1|C|316
*
9TKP|1|D1|G|337
9TKP|1|D1|A|338
9TKP|1|D1|C|339
*
9TKP|1|D1|G|350
9TKP|1|D1|G|351
9TKP|1|D1|C|352
9TKP|1|D1|A|353
9TKP|1|D1|G|354
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AO
- Small ribosomal subunit protein bS16
- Chain AT
- Small ribosomal subunit protein bS20
- Chain BN
- Large ribosomal subunit protein uL14
- Chain BS
- Large ribosomal subunit protein bL19
- Chain F2
- Translation initiation factor IF-2
Coloring options: