J5_9TKP_005
3D structure
- PDB id
- 9TKP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Initiation Complex with extended IF2 bound (70S IC-I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAG*CGUAC*GGG*CA*UG
- Length
- 15 nucleotides
- Bulged bases
- 9TKP|1|D2|A|532, 9TKP|1|D2|U|562
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKP|1|D2|C|531
9TKP|1|D2|A|532
9TKP|1|D2|G|533
*
9TKP|1|D2|C|560
9TKP|1|D2|G|561
9TKP|1|D2|U|562
9TKP|1|D2|A|563
9TKP|1|D2|C|564
*
9TKP|1|D2|G|577
9TKP|1|D2|G|578
9TKP|1|D2|G|579
*
9TKP|1|D2|C|1261
9TKP|1|D2|A|1262
*
9TKP|1|D2|U|2017
9TKP|1|D2|G|2018
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- Large ribosomal subunit protein bL32
- Chain BD
- Large ribosomal subunit protein uL4
- Chain BT
- Large ribosomal subunit protein bL20
- Chain BU
- Large ribosomal subunit protein bL21
- Chain BV
- Large ribosomal subunit protein uL22
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