J5_9TZ9_001

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9TZ9|1|a|U|58

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ9|1|a|C|55
9TZ9|1|a|G|56
9TZ9|1|a|A|57
9TZ9|1|a|U|58
9TZ9|1|a|G|59
9TZ9|1|a|A|60
9TZ9|1|a|A|61
9TZ9|1|a|G|62
*
9TZ9|1|a|C|124
9TZ9|1|a|G|125
9TZ9|1|a|A|126
9TZ9|1|a|A|127
9TZ9|1|a|U|128
9TZ9|1|a|G|129
*
9TZ9|1|a|C|138
9TZ9|1|a|A|139
*
9TZ9|1|a|U|152
9TZ9|1|a|A|153
9TZ9|1|a|U|154
*
9TZ9|1|a|A|180
9TZ9|1|a|G|181
9TZ9|1|a|G|182

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain y

Large ribosomal subunit protein bL34