J5_9WW6_003
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GCAAGC(OMC)GG*UG*UG*CGGACCAGG*CAC
- Length
- 25 nucleotides
- Bulged bases
- 9WW6|1|AA|G|3620, 9WW6|1|AA|G|3625
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|G|2855
9WW6|1|AA|C|2856
9WW6|1|AA|A|2857
9WW6|1|AA|A|2858
9WW6|1|AA|G|2859
9WW6|1|AA|C|2860
9WW6|1|AA|OMC|2861
9WW6|1|AA|G|2862
9WW6|1|AA|G|2863
*
9WW6|1|AA|U|2887
9WW6|1|AA|G|2888
*
9WW6|1|AA|U|3613
9WW6|1|AA|G|3614
*
9WW6|1|AA|C|3618
9WW6|1|AA|G|3619
9WW6|1|AA|G|3620
9WW6|1|AA|A|3621
9WW6|1|AA|C|3622
9WW6|1|AA|C|3623
9WW6|1|AA|A|3624
9WW6|1|AA|G|3625
9WW6|1|AA|G|3626
*
9WW6|1|AA|C|3835
9WW6|1|AA|A|3836
9WW6|1|AA|C|3837
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AE
- Large ribosomal subunit protein uL3
- Chain AT
- 60S ribosomal protein L19
- Chain AX
- 60S ribosomal protein L23
- Chain AY
- 60S ribosomal protein L24
Coloring options: