J5_9XFL_001

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9XFL|1|I|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFL|1|I|C|47
9XFL|1|I|G|48
9XFL|1|I|A|49
9XFL|1|I|U|50
9XFL|1|I|G|51
9XFL|1|I|A|52
9XFL|1|I|A|53
9XFL|1|I|G|54
*
9XFL|1|I|C|116
9XFL|1|I|G|117
9XFL|1|I|A|118
9XFL|1|I|A|119
9XFL|1|I|U|120
9XFL|1|I|G|121
*
9XFL|1|I|C|130
9XFL|1|I|A|131
*
9XFL|1|I|U|148
9XFL|1|I|A|149
9XFL|1|I|U|150
*
9XFL|1|I|A|176
9XFL|1|I|G|177
9XFL|1|I|G|178

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34