J5_9Y49_001
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUG*CGAUGAAG*CGAACG*CG*UAC
- Length
- 22 nucleotides
- Bulged bases
- 9Y49|1|A8|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y49|1|A5|G|19
9Y49|1|A5|U|20
9Y49|1|A5|G|21
*
9Y49|1|A8|C|35
9Y49|1|A8|G|36
9Y49|1|A8|A|37
9Y49|1|A8|U|38
9Y49|1|A8|G|39
9Y49|1|A8|A|40
9Y49|1|A8|A|41
9Y49|1|A8|G|42
*
9Y49|1|A8|C|101
9Y49|1|A8|G|102
9Y49|1|A8|A|103
9Y49|1|A8|A|104
9Y49|1|A8|C|105
9Y49|1|A8|G|106
*
9Y49|1|A8|C|113
9Y49|1|A8|G|114
*
9Y49|1|A8|U|136
9Y49|1|A8|A|137
9Y49|1|A8|C|138
Current chains
- Chain A5
- LSU-alpha rRNA (1722-MER)
- Chain A8
- 5.8S rRNA (157-MER)
Nearby chains
- Chain A6
- Large subunit ribosomal RNA; LSU rRNA
- Chain CN
- 60S ribosomal protein L15
- Chain CX
- 60S ribosomal protein L23a
- Chain Ch
- 60S ribosomal protein L35
- Chain Cj
- 60S ribosomal protein L37
- Chain Cl
- 60S ribosomal protein L39
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