J5_9Y49_010
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUCUUGG*CCCUUG*CGUU*AUGGAAUAG*CAUGAU
- Length
- 32 nucleotides
- Bulged bases
- 9Y49|1|B2|C|687, 9Y49|1|B2|C|741, 9Y49|1|B2|U|871, 9Y49|1|B2|A|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y49|1|B2|A|685
9Y49|1|B2|U|686
9Y49|1|B2|C|687
9Y49|1|B2|U|688
9Y49|1|B2|U|689
9Y49|1|B2|G|690
9Y49|1|B2|G|691
*
9Y49|1|B2|C|739
9Y49|1|B2|C|740
9Y49|1|B2|C|741
9Y49|1|B2|U|742
9Y49|1|B2|U|743
9Y49|1|B2|G|744
*
9Y49|1|B2|C|797
9Y49|1|B2|G|798
9Y49|1|B2|U|799
9Y49|1|B2|U|800
*
9Y49|1|B2|A|865
9Y49|1|B2|U|866
9Y49|1|B2|G|867
9Y49|1|B2|G|868
9Y49|1|B2|A|869
9Y49|1|B2|A|870
9Y49|1|B2|U|871
9Y49|1|B2|A|872
9Y49|1|B2|G|873
*
9Y49|1|B2|C|912
9Y49|1|B2|A|913
9Y49|1|B2|U|914
9Y49|1|B2|G|915
9Y49|1|B2|A|916
9Y49|1|B2|U|917
Current chains
- Chain B2
- 18S rRNA (1786-MER)
Nearby chains
- Chain AH
- 40S ribosomal protein S7
- Chain AL
- 40S ribosomal protein S11
- Chain AN
- 40S ribosomal protein S13
- Chain AW
- 40S ribosomal protein S15a
- Chain CR
- Large ribosomal subunit protein eL19
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