J6_10QM_001

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

10QM|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|G|45
10QM|1|I|G|46
*
10QM|1|I|C|179
10QM|1|I|G|180
10QM|1|I|A|181
10QM|1|I|A|182
10QM|1|I|C|183
*
10QM|1|I|G|214
10QM|1|I|G|215
10QM|1|I|A|216
10QM|1|I|A|217
10QM|1|I|A|218
10QM|1|I|A|219
10QM|1|I|G|220
10QM|1|I|A|221
10QM|1|I|A|222
10QM|1|I|A|223
10QM|1|I|U|224
*
10QM|1|I|A|231
10QM|1|I|G|232
10QM|1|I|A|233
10QM|1|I|U|234
10QM|1|I|U|235
*
10QM|1|I|A|262
10QM|1|I|G|263
10QM|1|I|C|264
10QM|1|I|A|265
10QM|1|I|G|266
*
10QM|1|I|C|426
10QM|1|I|U|427
10QM|1|I|A|428
10QM|1|I|A|429
10QM|1|I|A|430
10QM|1|I|U|431
10QM|1|I|A|432
10QM|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L34