J6_11BQ_001

3D structure

PDB id

11BQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

11BQ|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11BQ|1|a|G|45
11BQ|1|a|G|46
*
11BQ|1|a|C|179
11BQ|1|a|G|180
11BQ|1|a|A|181
11BQ|1|a|A|182
11BQ|1|a|C|183
*
11BQ|1|a|G|214
11BQ|1|a|G|215
11BQ|1|a|A|216
11BQ|1|a|A|217
11BQ|1|a|A|218
11BQ|1|a|A|219
11BQ|1|a|G|220
11BQ|1|a|A|221
11BQ|1|a|A|222
11BQ|1|a|A|223
11BQ|1|a|U|224
*
11BQ|1|a|A|231
11BQ|1|a|G|232
11BQ|1|a|A|233
11BQ|1|a|U|234
11BQ|1|a|U|235
*
11BQ|1|a|A|262
11BQ|1|a|G|263
11BQ|1|a|C|264
11BQ|1|a|A|265
11BQ|1|a|G|266
*
11BQ|1|a|C|426
11BQ|1|a|U|427
11BQ|1|a|A|428
11BQ|1|a|A|429
11BQ|1|a|A|430
11BQ|1|a|U|431
11BQ|1|a|A|432
11BQ|1|a|C|433

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34