J6_11EL_001

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

11EL|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11EL|1|a|G|45
11EL|1|a|G|46
*
11EL|1|a|C|179
11EL|1|a|G|180
11EL|1|a|A|181
11EL|1|a|A|182
11EL|1|a|C|183
*
11EL|1|a|G|214
11EL|1|a|G|215
11EL|1|a|A|216
11EL|1|a|A|217
11EL|1|a|A|218
11EL|1|a|A|219
11EL|1|a|G|220
11EL|1|a|A|221
11EL|1|a|A|222
11EL|1|a|A|223
11EL|1|a|U|224
*
11EL|1|a|A|231
11EL|1|a|G|232
11EL|1|a|A|233
11EL|1|a|U|234
11EL|1|a|U|235
*
11EL|1|a|A|262
11EL|1|a|G|263
11EL|1|a|C|264
11EL|1|a|A|265
11EL|1|a|G|266
*
11EL|1|a|C|426
11EL|1|a|U|427
11EL|1|a|A|428
11EL|1|a|A|429
11EL|1|a|A|430
11EL|1|a|U|431
11EL|1|a|A|432
11EL|1|a|C|433

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34