J6_11FV_001

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

11FV|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|G|45
11FV|1|I|G|46
*
11FV|1|I|C|179
11FV|1|I|G|180
11FV|1|I|A|181
11FV|1|I|A|182
11FV|1|I|C|183
*
11FV|1|I|G|214
11FV|1|I|G|215
11FV|1|I|A|216
11FV|1|I|A|217
11FV|1|I|A|218
11FV|1|I|A|219
11FV|1|I|G|220
11FV|1|I|A|221
11FV|1|I|A|222
11FV|1|I|A|223
11FV|1|I|U|224
*
11FV|1|I|A|231
11FV|1|I|G|232
11FV|1|I|A|233
11FV|1|I|U|234
11FV|1|I|U|235
*
11FV|1|I|A|262
11FV|1|I|G|263
11FV|1|I|C|264
11FV|1|I|A|265
11FV|1|I|G|266
*
11FV|1|I|C|426
11FV|1|I|U|427
11FV|1|I|A|428
11FV|1|I|A|429
11FV|1|I|A|430
11FV|1|I|U|431
11FV|1|I|A|432
11FV|1|I|C|433

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain k

Large ribosomal subunit protein bL34