J6_1FG0_001

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUA*UUUG*CG*CGCC*GUCUAGCGAACC*GAUGACAGAAAA

Length

38 nucleotides

Bulged bases

1FG0|1|A|U|2117, 1FG0|1|A|A|2425, 1FG0|1|A|A|2465, 1FG0|1|A|A|2467, 1FG0|1|A|A|2468

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1FG0|1|A|U|2115
1FG0|1|A|U|2116
1FG0|1|A|U|2117
1FG0|1|A|A|2118
*
1FG0|1|A|U|2276
1FG0|1|A|U|2277
1FG0|1|A|U|2278
1FG0|1|A|G|2279
*
1FG0|1|A|C|2292
1FG0|1|A|G|2293
*
1FG0|1|A|C|2315
1FG0|1|A|G|2316
1FG0|1|A|C|2317
1FG0|1|A|C|2318
*
1FG0|1|A|G|2421
1FG0|1|A|U|2422
1FG0|1|A|C|2423
1FG0|1|A|U|2424
1FG0|1|A|A|2425
1FG0|1|A|G|2426
1FG0|1|A|C|2427
1FG0|1|A|G|2428
1FG0|1|A|A|2429
1FG0|1|A|A|2430
1FG0|1|A|C|2431
1FG0|1|A|C|2432
*
1FG0|1|A|G|2459
1FG0|1|A|A|2460
1FG0|1|A|U|2461
1FG0|1|A|G|2462
1FG0|1|A|A|2463
1FG0|1|A|C|2464
1FG0|1|A|A|2465
1FG0|1|A|G|2466
1FG0|1|A|A|2467
1FG0|1|A|A|2468
1FG0|1|A|A|2469
1FG0|1|A|A|2470

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains