J6_1JZZ_001

3D structure

PDB id

1JZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GC*GGAAC*GGAGAAGAAAG*CGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

1JZZ|1|A|A|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZZ|1|A|G|44
1JZZ|1|A|C|45
*
1JZZ|1|A|G|156
1JZZ|1|A|G|157
1JZZ|1|A|A|158
1JZZ|1|A|A|159
1JZZ|1|A|C|160
*
1JZZ|1|A|G|191
1JZZ|1|A|G|192
1JZZ|1|A|A|193
1JZZ|1|A|G|194
1JZZ|1|A|A|195
1JZZ|1|A|A|196
1JZZ|1|A|G|197
1JZZ|1|A|A|198
1JZZ|1|A|A|199
1JZZ|1|A|A|200
1JZZ|1|A|G|201
*
1JZZ|1|A|C|208
1JZZ|1|A|G|209
1JZZ|1|A|A|210
1JZZ|1|A|U|211
1JZZ|1|A|U|212
*
1JZZ|1|A|A|239
1JZZ|1|A|U|240
1JZZ|1|A|C|241
1JZZ|1|A|A|242
1JZZ|1|A|G|243
*
1JZZ|1|A|C|439
1JZZ|1|A|U|440
1JZZ|1|A|A|441
1JZZ|1|A|A|442
1JZZ|1|A|A|443
1JZZ|1|A|U|444
1JZZ|1|A|A|445
1JZZ|1|A|C|446

Current chains

Chain A

23S rRNA

Nearby chains