3D structure

PDB id
1K73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC
Length
36 nucleotides
Bulged bases
1K73|1|A|A|193, 1K73|1|A|C|438
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1K73|1|A|G|41
1K73|1|A|C|42
*
1K73|1|A|G|149
1K73|1|A|G|150
1K73|1|A|A|151
1K73|1|A|A|152
1K73|1|A|C|153
*
1K73|1|A|G|184
1K73|1|A|G|185
1K73|1|A|A|186
1K73|1|A|A|187
1K73|1|A|C|188
1K73|1|A|A|189
1K73|1|A|G|190
1K73|1|A|A|191
1K73|1|A|A|192
1K73|1|A|A|193
1K73|1|A|A|194
*
1K73|1|A|U|202
1K73|1|A|G|203
1K73|1|A|A|204
1K73|1|A|U|205
1K73|1|A|G|206
*
1K73|1|A|U|233
1K73|1|A|A|234
1K73|1|A|C|235
1K73|1|A|A|236
1K73|1|A|G|237
*
1K73|1|A|C|433
1K73|1|A|U|434
1K73|1|A|A|435
1K73|1|A|A|436
1K73|1|A|A|437
1K73|1|A|C|438
1K73|1|A|A|439
1K73|1|A|C|440

Current chains

Chain A
23S RRNA

Nearby chains

Chain 2
RIBOSOMAL PROTEIN L37E
Chain E
RIBOSOMAL PROTEIN L4
Chain N
RIBOSOMAL PROTEIN L15E

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1247 s