J6_1VVJ_003
3D structure
- PDB id
- 1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.44 Å
Loop
- Sequence
- GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
- Length
- 36 nucleotides
- Bulged bases
- 1VVJ|1|YA|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1VVJ|1|YA|G|45
1VVJ|1|YA|C|46
*
1VVJ|1|YA|G|179
1VVJ|1|YA|G|180
1VVJ|1|YA|A|181
1VVJ|1|YA|A|182
1VVJ|1|YA|C|183
*
1VVJ|1|YA|G|214
1VVJ|1|YA|G|215
1VVJ|1|YA|A|216
1VVJ|1|YA|G|217
1VVJ|1|YA|A|218
1VVJ|1|YA|G|219
1VVJ|1|YA|G|220
1VVJ|1|YA|A|221
1VVJ|1|YA|A|222
1VVJ|1|YA|A|223
1VVJ|1|YA|G|224
*
1VVJ|1|YA|C|231
1VVJ|1|YA|G|232
1VVJ|1|YA|A|233
1VVJ|1|YA|C|234
1VVJ|1|YA|U|235
*
1VVJ|1|YA|A|262
1VVJ|1|YA|C|263
1VVJ|1|YA|C|264
1VVJ|1|YA|A|265
1VVJ|1|YA|G|266
*
1VVJ|1|YA|C|426
1VVJ|1|YA|U|427
1VVJ|1|YA|A|428
1VVJ|1|YA|A|429
1VVJ|1|YA|G|430
1VVJ|1|YA|U|431
1VVJ|1|YA|A|432
1VVJ|1|YA|C|433
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L35
Coloring options: