J6_28UI_001
3D structure
- PDB id
- 28UI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 28UI|1|a|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28UI|1|a|G|45
28UI|1|a|G|46
*
28UI|1|a|C|179
28UI|1|a|G|180
28UI|1|a|A|181
28UI|1|a|A|182
28UI|1|a|C|183
*
28UI|1|a|G|214
28UI|1|a|G|215
28UI|1|a|A|216
28UI|1|a|A|217
28UI|1|a|A|218
28UI|1|a|A|219
28UI|1|a|G|220
28UI|1|a|A|221
28UI|1|a|A|222
28UI|1|a|A|223
28UI|1|a|U|224
*
28UI|1|a|A|231
28UI|1|a|G|232
28UI|1|a|A|233
28UI|1|a|U|234
28UI|1|a|U|235
*
28UI|1|a|A|262
28UI|1|a|G|263
28UI|1|a|C|264
28UI|1|a|A|265
28UI|1|a|G|266
*
28UI|1|a|C|426
28UI|1|a|U|427
28UI|1|a|A|428
28UI|1|a|A|429
28UI|1|a|A|430
28UI|1|a|U|431
28UI|1|a|A|432
28UI|1|a|C|433
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
Coloring options: