J6_28UM_001
3D structure
- PDB id
- 28UM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, conformational excited state mutation in SSU-h41, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 28UM|1|a|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28UM|1|a|G|45
28UM|1|a|G|46
*
28UM|1|a|C|179
28UM|1|a|G|180
28UM|1|a|A|181
28UM|1|a|A|182
28UM|1|a|C|183
*
28UM|1|a|G|214
28UM|1|a|G|215
28UM|1|a|A|216
28UM|1|a|A|217
28UM|1|a|A|218
28UM|1|a|A|219
28UM|1|a|G|220
28UM|1|a|A|221
28UM|1|a|A|222
28UM|1|a|A|223
28UM|1|a|U|224
*
28UM|1|a|A|231
28UM|1|a|G|232
28UM|1|a|A|233
28UM|1|a|U|234
28UM|1|a|U|235
*
28UM|1|a|A|262
28UM|1|a|G|263
28UM|1|a|C|264
28UM|1|a|A|265
28UM|1|a|G|266
*
28UM|1|a|C|426
28UM|1|a|U|427
28UM|1|a|A|428
28UM|1|a|A|429
28UM|1|a|A|430
28UM|1|a|U|431
28UM|1|a|A|432
28UM|1|a|C|433
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
Coloring options: