J6_2QA4_001

3D structure

PDB id

2QA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GC*GGAAC*GGAACAGAAAA*UGAUG*UACAG*CUAAACAC

Length

36 nucleotides

Bulged bases

2QA4|1|0|A|193, 2QA4|1|0|C|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2QA4|1|0|G|41
2QA4|1|0|C|42
*
2QA4|1|0|G|149
2QA4|1|0|G|150
2QA4|1|0|A|151
2QA4|1|0|A|152
2QA4|1|0|C|153
*
2QA4|1|0|G|184
2QA4|1|0|G|185
2QA4|1|0|A|186
2QA4|1|0|A|187
2QA4|1|0|C|188
2QA4|1|0|A|189
2QA4|1|0|G|190
2QA4|1|0|A|191
2QA4|1|0|A|192
2QA4|1|0|A|193
2QA4|1|0|A|194
*
2QA4|1|0|U|202
2QA4|1|0|G|203
2QA4|1|0|A|204
2QA4|1|0|U|205
2QA4|1|0|G|206
*
2QA4|1|0|U|233
2QA4|1|0|A|234
2QA4|1|0|C|235
2QA4|1|0|A|236
2QA4|1|0|G|237
*
2QA4|1|0|C|433
2QA4|1|0|U|434
2QA4|1|0|A|435
2QA4|1|0|A|436
2QA4|1|0|A|437
2QA4|1|0|C|438
2QA4|1|0|A|439
2QA4|1|0|C|440

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain M

50S ribosomal protein L15e