J6_2ZJR_001

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

GC*GGAAC*GGAGAAGAAAG*CGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

2ZJR|1|X|A|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2ZJR|1|X|G|44
2ZJR|1|X|C|45
*
2ZJR|1|X|G|156
2ZJR|1|X|G|157
2ZJR|1|X|A|158
2ZJR|1|X|A|159
2ZJR|1|X|C|160
*
2ZJR|1|X|G|191
2ZJR|1|X|G|192
2ZJR|1|X|A|193
2ZJR|1|X|G|194
2ZJR|1|X|A|195
2ZJR|1|X|A|196
2ZJR|1|X|G|197
2ZJR|1|X|A|198
2ZJR|1|X|A|199
2ZJR|1|X|A|200
2ZJR|1|X|G|201
*
2ZJR|1|X|C|208
2ZJR|1|X|G|209
2ZJR|1|X|A|210
2ZJR|1|X|U|211
2ZJR|1|X|U|212
*
2ZJR|1|X|A|239
2ZJR|1|X|U|240
2ZJR|1|X|C|241
2ZJR|1|X|A|242
2ZJR|1|X|G|243
*
2ZJR|1|X|C|439
2ZJR|1|X|U|440
2ZJR|1|X|A|441
2ZJR|1|X|A|442
2ZJR|1|X|A|443
2ZJR|1|X|U|444
2ZJR|1|X|A|445
2ZJR|1|X|C|446

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain 2

50S ribosomal protein L34